Bakery lemon poppy seed muffins hide 40g of carbs under that sunny exterior. These? Just 3g net carbs—the lowest in our diabetic muffin collection. Learn the zesting trick that prevents bitter muffins and why you should skip the glaze for meal prep.
Keto Lemon Poppy Seed Muffins with poppy seeds on a wooden stand on a light background.

Bright citrus flavor. Delicate poppy seed crunch. Just 3g net carbs. These keto lemon poppy seed muffins made with almond flour are sunshine in muffin form—without the blood sugar storm that usually follows.

Traditional lemon poppy seed muffins from the bakery case can pack 40+ grams of carbs and enough sugar to spike your glucose for hours. This keto lemon poppy seed muffin recipe delivers all that zesty, tender goodness with 92% fewer carbs. It’s the lowest-carb option in our entire muffin collection—perfect for strict keto or diabetic meal plans.

⏱️ Quick Stats

Prep: 10 min
Cook: 20 min
Total: 30 min
Servings: 12 muffins
Calories: 155
Net Carbs: 3g
Protein: 6g
Fat: 13g
Fiber: 2g
✓ Keto
✓ Low-Carb
✓ Diabetic-Friendly
✓ Gluten-Free

🌿 Why This Recipe Works for Keto

Ultra-Low Net Carbs: At just 3g net carbs per muffin, these keto lemon poppy seed muffins fit easily into your daily macros. Perfect for strict keto limits or leaving room for other foods in your meal.

Zero Added Sugar: Fresh lemon provides all the brightness you need—no sugar required. Erythritol adds sweetness without any glycemic impact, keeping you in ketosis.

Keto-Friendly Fats: With 13g of healthy fats per muffin from almond flour, eggs, and butter, these muffins help you hit your fat macros while staying satisfied longer.

Solid Protein: 6g protein per muffin supports muscle maintenance on keto. The protein and fat together help slow any glucose response from the minimal carbs present—great news for diabetics too.

Only 1g Sugar: The tiny amount of sugar comes naturally from the almond flour and eggs. No added sugars, no hidden sweeteners, no surprises.

Bakery Lemon Poppy Seed vs. This Keto Version

Nutrient Bakery Muffin This Recipe Difference
Total Carbs 42g 5g -37g (88%)
Net Carbs 40g 3g -37g (92%)
Sugar 26g 1g -25g (96%)
Protein 4g 6g +2g (50%)
Fiber 1g 2g +1g (100%)
Keto-Friendly? ❌ No ✅ Yes

Chef’s Tips for Perfect Keto Lemon Poppy Seed Muffins

Zest Before You Juice: Always zest your lemons before cutting them open. It’s nearly impossible to zest a juiced lemon half. You’ll need about 2 lemons for the zest and 1 for the juice.

Avoid the Bitter Pith: Only zest the bright yellow outer layer of the lemon. The white pith underneath is bitter and will ruin the fresh, bright flavor you’re after. Use a microplane for the finest zest.

Room Temperature Eggs: Cold eggs can cause the melted butter to seize into clumps. Set eggs out 30 minutes before baking, or place them in warm water for 5 minutes.

Skip the Glaze for Meal Prep: The optional glaze is delicious but softens over time. For meal prep, store muffins unglazed and add the glaze just before serving for the best texture.

Boost the Lemon: Want more citrus punch? Add 1/4 teaspoon of pure lemon extract to the wet ingredients. It intensifies the lemon flavor without adding carbs.

📦 Storage & Serving Suggestions

Room Temperature: Store unglazed muffins in an airtight container for up to 3 days. The lemon flavor actually intensifies on day two.

Refrigerator: For longer storage, refrigerate for up to 1 week. Bring to room temperature or warm briefly before serving.

Freezer: Freeze unglazed muffins individually wrapped for up to 3 months. Thaw overnight in the fridge or microwave for 30 seconds. Add glaze after thawing.

Keto Meal Prep: Bake a batch on Sunday and store unglazed. Grab one each morning for a quick keto breakfast, or pack for work as an afternoon snack.

Serving Ideas: Pair with a cup of Earl Grey tea, serve alongside a spring vegetable frittata for brunch, or enjoy as an afternoon snack with Greek yogurt.

Keto Lemon Poppy Seed Muffins FAQs

Can I use bottled lemon juice instead of fresh?

Fresh is best for flavor, but bottled works in a pinch. Use the same amount of bottled juice, but you’ll miss out on the fresh zest, which provides most of the lemon flavor. Consider adding 1/4 teaspoon lemon extract to compensate.

Why are my keto muffins bitter?

Bitter lemon muffins usually mean you zested too deeply and got the white pith. Only zest the bright yellow outer layer. A microplane gives you the finest zest without reaching the pith.

Does the glaze add carbs?

The erythritol glaze adds minimal carbs—less than 0.5g per muffin. If you’re tracking macros strictly, skip the glaze. These keto lemon poppy seed muffins are delicious either way.

Can I make these nut-free?

Almond flour is essential for the texture of these muffins. For a nut-free version, you’d need a completely different recipe using sunflower seed flour, which behaves differently and may turn green due to a reaction with baking powder.

Keto Lemon Poppy Seed Muffins with poppy seeds on a wooden stand on a light background.
5fad0ee9b4f16fa1899c9b79292891e2b99e43153f738b1a83e6c6996ed8a167?s=30&d=blank&r=gJon Simon

Keto Lemon Poppy Seed Muffins

No ratings yet
Bright, zesty lemon muffins with a delicate crunch from poppy seeds. Only 3g net carbs per muffin—sunshine in every bite without the sugar spike.
Prep Time 10 minutes
Cook Time 20 minutes
Total Time 30 minutes
Servings: 12 muffins
Course: Breakfast, Dessert, Snack
Cuisine: American
Calories: 155

Ingredients
  

Dry Ingredients
  • 2 cups almond flour finely ground
  • 1/3 cup granulated erythritol or monk fruit sweetener
  • 2 tablespoons poppy seeds
  • 1 1/2 teaspoons baking powder
  • 1/4 teaspoon salt
Wet Ingredients
  • 3 large eggs room temperature
  • 1/4 cup unsalted butter melted and slightly cooled
  • 3 tablespoons fresh lemon juice about 1 large lemon
  • 2 tablespoons lemon zest about 2 lemons
  • 1 teaspoon vanilla extract
Optional Lemon Glaze
  • 3 tablespoons powdered erythritol
  • 1 tablespoon fresh lemon juice

Equipment

Method
 

  1. Preheat your oven to 350°F (175°C). Line a 12-cup muffin tin with paper liners.
  2. In a large mixing bowl, whisk together the almond flour, erythritol, poppy seeds, baking powder, and salt until well combined.
  3. In a medium bowl, whisk together the eggs, melted butter, lemon juice, lemon zest, and vanilla extract until smooth. The mixture will be bright and fragrant.
  4. Pour the wet ingredients into the dry ingredients and stir with a rubber spatula until just combined. The batter will be thick but scoopable.
  5. Divide the batter evenly among the 12 muffin cups, filling each about 2/3 full.
  6. Bake for 18-20 minutes, until the tops are light golden and a toothpick inserted into the center comes out clean.
  7. Allow muffins to cool in the tin for 5 minutes, then transfer to a wire rack to cool completely before glazing.
  8. Optional glaze: Whisk together the powdered erythritol and lemon juice until smooth. Drizzle over the cooled muffins and let set for 5 minutes before serving.

Nutrition

Serving: 1gCalories: 155kcalCarbohydrates: 5gProtein: 6gFat: 13gSaturated Fat: 3gSodium: 90mgFiber: 2gSugar: 1g

Notes

Storage: Keep unglazed muffins in an airtight container at room temperature for 3 days, refrigerate for up to 1 week, or freeze for up to 3 months. Add glaze just before serving for best texture.
Lemon Intensity: For an extra lemony punch, add 1/4 teaspoon of lemon extract to the wet ingredients.
Zesting Tip: Only zest the bright yellow part of the lemon—the white pith underneath is bitter.
Spring Perfect: These muffins are a wonderful addition to Easter brunch or any spring gathering!
Skip the Glaze: Without the glaze, these are 3g net carbs. The glaze adds minimal carbs but isn’t necessary—they’re delicious either way.

Tried this recipe?

Let us know how it was!

🧁 More Keto Muffin Recipes

Love these keto lemon poppy seed muffins? Explore all five flavors in our keto muffins collection—all made with almond flour, all diabetic-friendly.

Almond Flour Blueberry Muffins
Bursting with fresh berries
Keto Cinnamon Streusel Muffins
Buttery crumb topping
Passover Lemon Almond Cake
More citrus goodness
Almond Flour Strawberry Shortcake
Elegant low-carb dessert

Medical Disclaimer: The nutritional information and diabetic-friendly adaptations provided in this article are for informational purposes only. While we strive for accuracy, we are culinary experts, not medical doctors. Individual responses to foods vary, and you should always consult with your healthcare provider or registered dietitian about dietary changes, especially if you’re managing diabetes or other health conditions. Always monitor your blood sugar as recommended by your healthcare team.

Advertisements

Tags

LinkedIn
Pinterest
Facebook
X

The Lunch Pro website contains links to affiliate websites, and we receive an affiliate commission for any purchases you make on the affiliate website using such links, including Amazon Services LLC Associates Program, an affiliate advertising program designed to provide a means for us to earn advertising fees by linking to Amazon.com and affiliated websites.

Pinterest
Pinterest
Pinterest
Instagram
Facebook20
LinkedIn
Share
RSS
X (Twitter)
Visit Us
Follow Me
Tweet
Follow by Email42